Calibrachoa is an annual flowering plant of the family Solanaceae. It is result of selection species Petunia Hybrida. The first hybrid of calibrachoa was presented by Japanese breeders (Million Bells series) in 1997. After that appears 15 different series. Calibrachoa is perennial with numerous flowers who adorned hanging baskets on terraces and balconies and appears in several colors. Bacopa is annual or perennial flowering plant of the family Scrophulaceae. It was discovered in 1992 in Africa as a wetland, tropical species. It is ideal decoration for rocky grounds, balconies and terraces, especially in combination with the previously mentioned calibrachoa, related flowering plants or small trees. At some bacopa species were identified medicinal properties. The paper describes five diseases and three pests that are mentioned in the literature as the most important in the cultivation calibrachoa and bacopa in protected areas. The aim of the final paper was monitor the occurrence of diseases and pests transplants calibrachoa and Bacopa in greenhouse production and get acquainted with the protection program on the family farm Škledar in 2015. Because of the quality and timely implemented preventive care which are secured conditions proper growth and development and the application of plant protection products, there was a minimal occurrence of diseases and pests which enabled the production of healthy and beautiful transplants.